Task Script

• Slug: common/agilent-chemstation-raw-json-to-ids/chemstation-agilent-series1200-raw-json-to-ids
• Version: v1.0.0
• Changes:
  • Improve internal code documentation and cleanliness

Protocol

• Slug: common/chemstation-agilent-series1200-raw-json-to-ids/
• Version: v1.0.0
• Changes:
  • Bug Fix -- correct slugs in protocol

IDS

• Slug: common/lcuv-empower
• Version: v8.0.0
• Changes:
  • Add system.node to IDS using data from Injection.Node
  • Add system.creation_date to IDS using data from Injection.SystemCreateDate
  • Add components field to method.processing[*]
  • Add results[*].faults to IDS using data from Results[*].Faults
  • Add results[*].processing_locked to IDS using data from Results[*].ProcessingLocked
  • Add results[*].codes to IDS using data from Results[*].ResultCodes
  • Update method.processing[*].parameter.system_suitability.half_Height_multiplier_for_ep_signal_to_noise_noise_region to fully snake case by converting half_Height to half_height
  • Update method.processing[*].parameter.system_suitability.half_Height_multiplier_for_jp_signal_to_noise_noise_region to fully snake case by converting half_Height to half_height
  • Update system.comment to point to Injection.SystemComments
  • Update method.processing[*].parameter.id to method.processing[*].id
  • Update method.processing[*].parameter.name to method.processing[*].name
  • Update method.processing[*].parameter.integration_algorithm to method.processing[*].integration_algorithm
  • Update field name method.processing[*].parameter.integration.integration_start by changing integration_start to start to remove redundancy
  • Update field name method.processing[*].parameter.integration.integration_end by changing integration_end to end to remove redundancy

Task Script

• Slug: common/empower-raw-to-ids
• Version: v7.0.0
• Changes:
  • Add function which map non-datacube fields from -50000 or -2147483648 to null
  • Add functions to map pharmacopoeia, baseline noise minimum, and noise value for signal:noise from raw values provided by agent
  • Update regex which captures signOffReason to capture the entire text instead of a single word
  • Update parser to follow common/lcuv-empower IDS v8.0.0

Protocol

• Slug: common/empower-raw-to-ids
• Version: v3.8.0
• Changes:
  • Update protocol steps to use common/empower-raw-to-ids v7.0.0

IDS

• Slug: common/raman-microscope-renishaw-invia
• Version: v2.0.0
• Changes:
  • Update users, samples to follow standard conventions
  • Update most fields to be nullable
  • Change systems to include vendor, model, type
  • Add @idsConventionVersion
  • Fix typos

Task Script

• Slug: common/renishaw-invia-raw-to-ids
• Version: v2.0.0
• Changes:
  • Update to follow IDS update
  • Add logic to parse zip(spc+txt) file

Protocol

• Slug: common/renishaw-invia-raw-to-ids
• Version: v1.2.0
• Changes:
  • Update protocol steps to use common/renishaw-invia-raw-to-ids v2.0.0

• Slug: common/plate-reader-thermofisher-cellinsight-cx5
• Version: v1.0.0
• Changes:
  • First version