IDS

• Slug: common/ms-xcalibur
• Version: v6.0.0
• Changes:
  • Add "name", "measures", "dimensions" to required datacubes items
  • Rename generalValueUnit to value_unit_object to use snake case naming
  • Remove unnecessary runs[*].system_specific_field.number_of_spectra.additionalProperties field
  • Remove many fields in required array because they should not be required by convention

Task Script

• Slug: common/thermofisher-xcalibur-raw-json-to-ids
• Version: v6.0.0
• Changes:
  • Add fault tolerance for overflowed integers and floats that are meant to represent minimum values for runs[*].time.start and runs[*].time.stop
    • Example: 1e20 minutes (1.9e14 years)
  • Update to refer to IDS ms-xcalibur v6.0.0
  • Remove requirement to have a datacubes object

Protocol

• Slug: common/thermofisher-xcalibur-raw-to-ids
• Version: v3.4.0
• Changes:
  • Update to use task script common/thermofisher-xcalibur-raw-json-to-ids version v6.0.0

• Slug: common/agilent-chemstation-raw-to-raw-json
• Version: v1.0.1
• Changes:
  • Fix bugs
• Slug: common/agilent-chemstation-raw-json-to-ids
• Version: v1.0.1
• Changes:
  • Fix bugs

• Slug: common/chemstation-agilent-series1200-raw-json-to-ids
• Version: v1.0.1
• Changes:
  • Update to use task script common/agilent-chemstation-raw-to-raw-json version v1.0.1
  • Update to use task script common/agilent-chemstation-raw-json-to-ids version v1.0.1

• Slug: common/biotek-gen5-raw-to-ids
• Version: v1.0.1
• Changes:
  • Fix issue where parser would fail if the value for the field Experiment File Path was blank
  • Fix issue where multiple nested keys in protocol cause parser failure
  • Datacubes with all null measures[*].value trigger a logged warning and are no longer included in output IDS

• Slug: common/biotek-gen5-raw-to-ids
• Version: v1.0.1
• Changes:
  • Update to use task script common/biotek-gen5-raw-to-ids version v1.0.1

• Slug: common/gel-imager-bio-rad-gel-doc-xr
• Version: v1.0.0
• Changes:
  • First release