2021.11_1 Artifact Release Notes
RELEASE DATE: 11 NOVEMBER 2021
Bug Fixes
DE-2686 ThermoFisher XCalibur - Investigate OverflowErrors
-
IDS
- Slug: common/ms-xcalibur
- Version: v6.0.0
- Changes:
- Add
"name", "measures", "dimensions"
to required datacubes items - Rename
generalValueUnit
tovalue_unit_object
to use snake case naming - Remove unnecessary
runs[*].system_specific_field.number_of_spectra.additionalProperties
field - Remove many fields in required array because they should not be required by convention
- Add
-
Task Script
- Slug: common/thermofisher-xcalibur-raw-json-to-ids
- Version: v6.0.0
- Changes:
- Add fault tolerance for overflowed integers and floats that are meant to represent minimum values for
runs[*].time.start
andruns[*].time.stop
- Example:
1e20
minutes (1.9e14
years)
- Example:
- Update to refer to IDS
ms-xcalibur
v6.0.0 - Remove requirement to have a
datacubes
object
- Add fault tolerance for overflowed integers and floats that are meant to represent minimum values for
-
Protocol
- Slug: common/thermofisher-xcalibur-raw-to-ids
- Version: v3.4.0
- Changes:
- Update to use task script
common/thermofisher-xcalibur-raw-json-to-ids
version v6.0.0
- Update to use task script
DE-2702 Chemstation bug fixes
- Task Script
- Slug: common/agilent-chemstation-raw-to-raw-json
- Version: v1.0.1
- Changes:
- Fix bugs
- Slug: common/agilent-chemstation-raw-json-to-ids
- Version: v1.0.1
- Changes:
- Fix bugs
- Protocol
- Slug: common/chemstation-agilent-series1200-raw-json-to-ids
- Version: v1.0.1
- Changes:
- Update to use task script
common/agilent-chemstation-raw-to-raw-json
version v1.0.1 - Update to use task script
common/agilent-chemstation-raw-json-to-ids
version v1.0.1
- Update to use task script
DE-2817 Fix Gen5 Bugs
- Task Script
- Slug: common/biotek-gen5-raw-to-ids
- Version: v1.0.1
- Changes:
- Fix issue where parser would fail if the value for the field
Experiment File Path
was blank - Fix issue where multiple nested keys in protocol cause parser failure
- Datacubes with all
null
measures[*].value
trigger a logged warning and are no longer included in output IDS
- Fix issue where parser would fail if the value for the field
- Protocol
- Slug: common/biotek-gen5-raw-to-ids
- Version: v1.0.1
- Changes:
- Update to use task script
common/biotek-gen5-raw-to-ids
version v1.0.1
- Update to use task script
Enhancements (New Features and Functionality)
DE-2322 Bio-Rad Gel Doc XR+ - Create IDS
- IDS
- Slug: common/gel-imager-bio-rad-gel-doc-xr
- Version: v1.0.0
- Changes:
- First release
Updated 11 months ago