IDS

• namespace: common
• slug: sanger-sequencer-thermofisher-abi
• version: v1.0.0
• changelog:
  • First Release

Protocol

• namespace: common
• slug: chromeleon-raw-to-ids
• version: v2.1.0
• changelog:
  • Update to use task script common/chromeleon-raw-to-ids:v3.0.0

Task Script

• namespace: common
• slug: chromeleon-raw-to-ids
• version: v3.0.0
• changelog:
  • None-backward-compatible: this version only supports JSON files produced by Tetra Chromeleon Agent v2 and newer
  • Update parser to use IDS common/thermofisher-chromeleon:v2.0.0
  • Update to handle 3D UV-VIS data from SpectralFields
  • Add fields to methods to capture more information on injections and detections
  • Update results to better capture detector/peak information
  • Update to capture column and module information for different chromatography instrumentation configurations

IDS

• namespace: common
• slug: thermofisher-chromeleon
• version: v2.0.0
• changelog:
  • Update raw to IDS mapping table
  • Update schema.json to ensure it reflects mapping
    • Add datacubes[*].label
    • Remove mass_spectrometer_settings[*].signal_description, ionization_mode, acquisition_mode and remove these three from mass_spectrometer_settings.required
    • Update gradient_settings.composition.solvent from Nullable_number to nullable_str
    • Update from methods[0].processing.mass_spectrometry_library_screening to mass_spectrometry_library_screening_parameters
    • Update methods[0].processing.peak_group_parameters[*].time.start_time to methods[0].processing.peak_group_parameters[*].time.start
    • Update methods[0].processing.peak_group_parameters[*].time.start and methods[0].processing.peak_group_parameters[*].time.end from nullable number to raw value unit.