2021.10_0-1 Artifact Release
RELEASE DATE: 6 OCTOBER 2021
Bug Fixes
DE-2680: Fix Chemstation Raw to IDS protocol
-
Task Script
- Slug: common/agilent-chemstation-raw-json-to-ids/chemstation-agilent-series1200-raw-json-to-ids
- Version: v1.0.0
- Changes:
- Improve internal code documentation and cleanliness
-
Protocol
- Slug: common/chemstation-agilent-series1200-raw-json-to-ids/
- Version: v1.0.0
- Changes:
- Bug Fix -- correct slugs in protocol
Enhancements (New Features and Functionality)
Empower IDS and Pipeline improvements
-
IDS
- Slug: common/lcuv-empower
- Version: v8.0.0
- Changes:
- Add
system.node
to IDS using data fromInjection.Node
- Add
system.creation_date
to IDS using data fromInjection.SystemCreateDate
- Add
components
field tomethod.processing[*]
- Add
results[*].faults
to IDS using data fromResults[*].Faults
- Add
results[*].processing_locked
to IDS using data fromResults[*].ProcessingLocked
- Add
results[*].codes
to IDS using data fromResults[*].ResultCodes
- Update
method.processing[*].parameter.system_suitability.half_Height_multiplier_for_ep_signal_to_noise_noise_region
to fully snake case by convertinghalf_Height
tohalf_height
- Update
method.processing[*].parameter.system_suitability.half_Height_multiplier_for_jp_signal_to_noise_noise_region
to fully snake case by convertinghalf_Height
tohalf_height
- Update
system.comment
to point toInjection.SystemComments
- Update
method.processing[*].parameter.id
tomethod.processing[*].id
- Update
method.processing[*].parameter.name
tomethod.processing[*].name
- Update
method.processing[*].parameter.integration_algorithm
tomethod.processing[*].integration_algorithm
- Update field name
method.processing[*].parameter.integration.integration_start
by changingintegration_start
tostart
to remove redundancy - Update field name
method.processing[*].parameter.integration.integration_end
by changingintegration_end
toend
to remove redundancy
- Add
-
Task Script
- Slug: common/empower-raw-to-ids
- Version: v7.0.0
- Changes:
- Add function which map non-datacube fields from
-50000
or-2147483648
to null - Add functions to map
pharmacopoeia
,baseline noise minimum
, andnoise value for signal:noise
from raw values provided by agent - Update regex which captures
signOffReason
to capture the entire text instead of a single word - Update parser to follow common/lcuv-empower IDS v8.0.0
- Add function which map non-datacube fields from
-
Protocol
- Slug: common/empower-raw-to-ids
- Version: v3.8.0
- Changes:
- Update protocol steps to use
common/empower-raw-to-ids
v7.0.0
- Update protocol steps to use
DE-2545: Update Renishaw IDS and pipeline to ingest TXT+SPC
-
IDS
- Slug: common/raman-microscope-renishaw-invia
- Version: v2.0.0
- Changes:
- Update
users
,samples
to follow standard conventions - Update most fields to be nullable
- Change
systems
to includevendor
,model
,type
- Add
@idsConventionVersion
- Fix typos
- Update
-
Task Script
- Slug: common/renishaw-invia-raw-to-ids
- Version: v2.0.0
- Changes:
- Update to follow IDS update
- Add logic to parse zip(spc+txt) file
-
Protocol
- Slug: common/renishaw-invia-raw-to-ids
- Version: v1.2.0
- Changes:
- Update protocol steps to use
common/renishaw-invia-raw-to-ids
v2.0.0
- Update protocol steps to use
DE-2368: Thermofisher Cellinsight CX5 IDS
- IDS
- Slug: common/plate-reader-thermofisher-cellinsight-cx5
- Version: v1.0.0
- Changes:
- First version
Updated 10 months ago