2021.12_1 Artifact Release
RELEASE DATE: DECEMBER 8, 2021
Bugs
DE-2830 plate-reader-bmg-labtech-nephelometry-fluorescence
-
IDS
- namespace:
common
- slug:
plate-reader-bmg-labtech-nephelometry-fluorescence
- version:
v1.0.1
- changelog:
- Fix bug in definition of
nullable_boolean
's type, from["string", "null"]
to["boolean", "null"]
- Fix bug in definition of
- namespace:
-
Protocol
- namespace:
common
- slug:
bmg-labtech-plate-reader-raw-to-ids
- version:
v1.0.1
- changelog:
- Update to use task script
common/bmg-labtech-util:v6.0.1
- Update to use task script
- namespace:
-
Task Script
- namespace:
common
- slug:
bmg-labtech-util
- version:
v6.0.1
- changelog:
- Update Nephelometry and Fluorescence IDS JSON outputs to use IDS
common/plate-reader-bmg-labtech-nephelometry-fluorescence:v1.0.1
, no other changes affecting the IDS JSON output
- Update Nephelometry and Fluorescence IDS JSON outputs to use IDS
- namespace:
DE-2966 Fix masslynx-util/v4.0.1 tests, DE-2908 ms-masslynx
-
IDS
- namespace:
common
- slug:
ms-masslynx
- version:
v4.0.1
- changelog:
- Add
['name','measures','dimensions']
to the list of required fields fordatacubes
to follow IDS conventions
- Add
- namespace:
-
Protocol
- namespace:
common
- slug:
waters-masslynx-raw-to-ids
- version:
v2.2.2
- changelog:
- Update to use
masslynx-util
v4.0.2
- Update to use
- namespace:
-
Task Script
- namespace:
common
- slug:
masslynx-util
- version:
v4.0.2
- changelog:
- Update to use IDS
common/ms-masslynx:v4.0.1
:@idsVersion
in the output IDS JSON changes fromv4.0.0
tov4.0.1
with no other change
- Update to use IDS
- namespace:
Enhancements (New Features and Functionality)
DE-2936 Little Lunatic, and Big Lunatic Changes
-
Protocol
- namespace:
common
- slug:
unchained-labs-lunatic-util
- version:
v2.3.3
- changelog:
- Update to use task script
unchained-labs-lunatic-util:v4.3.0
- Update to use task script
- namespace:
-
Task Script
- namespace:
common
- slug:
unchained-labs-lunatic-util
- version:
v4.3.0
- changelog:
- Update Lunatic Protein Concentration parser to not require the presence of the
Sample name
column in the raw data - Update parser to not fail if date column is empty
- Update Lunatic Protein Concentration parser to not require the presence of the
- namespace:
DE-2885 Nanotemper, Prometheus NT Plex Differential Scanning Fluorimetry - Update IDS
-
IDS
- namespace:
common
- slug:
dsf-nanotemper-prometheus
- version:
v5.0.0
- changelog:
- Each sample is linked to its capillary tube.
The capillary tubes in one experiment are sorted by its index as indicated in tCapillary.IndexOnParentContainer.
Sample identity of each melting curve is tracked in table tCapillary with mMeltingCurve.container == tCapillary.ID column.
results[*].measures[*].temperatures
of each curve are tracked in table InflectionPoint and table MeltingCurveMarker via the InflectionPoint.MeltingCurve == mMeltingCurve.ID column or MeltingCurveMarker.MeltingCurve == mMeltingCurve.ID. - Merge
results[*].measures[*].melting_temperatures[*]
andresults[*].measures[*].onset_temperature
toresults[*].measures[*].temperatures[*]
- Explicitly exclude handling and discovery records that do not fall in the time span of an experiment, as noted by aSeries.Caption == "Performing melting curve scan".
- Calculate and include "temperature slope" for each experiment step. This requires using MeltingCurveScan to identify experiment steps.
- Include Operator.FullName, Operator.Initials, and Operator.LoginName in
users[*]
. - In table Annotation, records with AnnotationRole == "target" and AnnotationType == "dlmless" is used to as
samples[*].id
to be consistent with the software UI. - Add
datacubes[*].name
as<StartingTemperature> -(<Duration>)- <EndTemperature>
for each experiment step.
- Each sample is linked to its capillary tube.
- namespace:
DE-2692 Create v0 Leica Aperio Parser
-
Protocol
- namespace:
common
- slug:
leica-aperio-raw-to-ids
- version:
v0.1.0
- changelog:
- First release
- namespace:
-
Task Script
- namespace:
common
- slug:
leica-aperio-raw-to-ids
- version:
v0.1.0
- changelog:
- First release
- namespace:
DE-2523 Bio-Rad Gel Doc XR+ - Create Raw to IDS Parser
-
Protocol
- namespace:
common
- slug:
bio-rad-gel-doc-xr-raw-to-ids
- version:
v1.0.0
- changelog:
- First release
- namespace:
-
Task Script
- namespace:
common
- slug:
bio-rad-gel-doc-xr-raw-to-ids
- version:
v1.0.0
- changelog:
- First release
- namespace:
Updated 10 months ago