Protocol

• namespace: common
• slug: advanced-instruments-osmometer-raw-to-ids
• version: v2.0.2
• changelog:
  • Update to use common/advanced-instruments-osmometer-raw-to-ids:v2.0.2 task script

Task Script

• namespace: common
• slug: advanced-instruments-osmometer-raw-to-ids
• version: v2.0.2
• changelog:
  • Update mapping.json to include samples[*].id

Protocol

• namespace: common
• slug: bruker-sierra-spr32-util
• version: v2.2.4
• changelog:
  • Update to use task script common/bruker-sierra-spr32-util:v3.0.2

Task Script

• namespace: common
• slug: bruker-sierra-spr32-util
• version: v3.0.2
• changelog:
  • Fix injection parsing bug where non-injection events from from AssayData.Method.BatchElements.BatchMethodElement.Commands.BatchCommand were added to methods[*].cycles[*].injections[].
  • Fix rack parsing bug where the racks DWP384, MTP96, and CRR3x8 would cause an
    error or be parsed as an incorrect rack type.
  • Fix ligand parsing bugs that caused systems[0].component.sensor.multiple_ligands
    to always be True and always parsing ligands as though only a single ligand was present.

Protocol

• namespace: common
• slug: thermofisher-xcalibur-raw-to-ids
• version: v3.6.1
• changelog:
  • Update to use task script common/thermofisher-xcalibur-raw-json-to-ids:v6.1.1

IDS

• namespace: common
• slug: thermogravimetric-analyzer-ta-q500
• version: v2.0.0
• changelog:
  • Update Readme to follow current convention
  • Update schema.json to follow @idsConventionVersion version 1.0.0
    • Change samples section
    • Change systems section to add software and module
    • Change methods section
  • Change runs section to add pan_number, weight fields
  • Update elasticsearch.json to match the new schema
  • Add more sample files

IDS

• namespace: common
• slug: flow-imaging-microscopy-yft-flowcam
• version: v5.0.0
• changelog:
  • Add the following to results[*].summary_stats[*] that are new for v5 of the VisualSpreadsheet Particle Analysis software (ViSP)
    • harmonic_mean and total stats, each with value and unit
    • percentiles that contain a list of objects with percentile, value, and unit keys
  • Update results[*].filter_grid[*].particle_per_milliliter to results[*].filter_grid[*].particles_per_milliliter
  • Update in results[*].filter_metadata[*]. the following to correct names and to make them consistent with items in filter_grid:
    • nullable number particle_count to value/unit count
    • nullable number particle_per_milliliter to value/unit particles_per_image
    • nullable number particle_per_inch to value/unit particles_per_image

Protocol

• namespace: common
• slug: unchained-labs-lunatic-util
• version: v2.6.0
• changelog:
  • Update to use task script common/unchained-labs-lunatic-util:v6.0.0

Task Script

• namespace: common
• slug: unchained-labs-lunatic-util
• version: v6.0.0
• changelog:
  • Update to use IDS common/plate-reader-unchained-labs-lunatic:v6.0.0

Protocol

• namespace: common
• slug: decorate-with-dataweave
• version: v1.0.4
• changelog:
  • Update to use task script common/dataweave-util:v1.0.4

Protocol

• namespace: common
• slug: transform-with-dataweave
• version: v1.0.4
• changelog:
  • Update to use task script common/dataweave-util:v1.0.4

Task Script

• namespace: common
• slug: dataweave-util
• version: v1.0.4
• changelog:
  • Update main to pass input file labels as 'customLabels' to the eql search allowing the ability to find reference file using data from input file's labels