2022.5_1-1 Artifact Release
RELEASE DATE: May 6, 2022
Enhancements (New Features and Functionality)
DE-3334 Chemstation - Update parser to handle new IDS
-
Protocol
- namespace:
common
- slug:
agilent-chemstation-raw-to-ids
- version:
v2.0.0
- changelog:
- Changed to a two-step protocol to parse raw Chemstation files to the
agilent-chemstation
IDS - Updated
agilent-chemstation-raw-json-to-ids
version
- Changed to a two-step protocol to parse raw Chemstation files to the
- namespace:
-
Task Script
- namespace:
common
- slug:
agilent-chemstation-raw-json-to-ids
- version:
v2.0.0
- changelog:
- IDS change from
lcuv-chemstation
toagilent-chemstation
systems
updates:component.detectors
updated tocomponent.modules
, as this should also include parts such as the column compartment, pumps, etc., that are not detectors sensu stricto.component.column
added to contain column information, such as adescription
,length
,diameter
,particle_size
, and various other parameters.
users
updated to match IDS Convention Version v1.0.0, requirements.samples
has been updated to match the IDS Convention Version v1.0.0 required format and to reduce the inclusion of redundant information.methods[]
array now has sections foracquisition_method
,injection
,detectors
(previously, themethods
section only accepted some basic parameters relevant to DAD detectors), andmobile_phase
.acquisition_method
is the method name.injection
includes parameters relevant to the injection and run, such as the columnflow
,pressure
,temperature
, injectionvolume
, andrun_length
.detectors
has four potential objects:uv_vis
to captureDAD
,MWD
,VWD
, and similar detectors.charged_aerosol
to captureCAD
detectorsmass_spectrometer
to captureMSD
detectors.other
to capture some basic descriptor information detector not in the types above.
mobile_phase
includes an array ofsolvents
, a string forelution_mode
(isocratic or gradient), and agradient_table
.
- Changed to
results
section for organization and logical grouping
- IDS change from
- namespace:
Bug Fixes
DE-3716 Big Lunatic - Update error message for missing Plate ID
-
Protocol
- namespace:
common
- slug:
unchained-labs-lunatic-util
- version:
v2.5.2
- changelog:
- Update to use task script
common/unchained-labs-lunatic-util:v5.0.2
- Update to use task script
- namespace:
-
Task Script
- namespace:
common
- slug:
unchained-labs-lunatic-util
- version:
v5.0.2
- changelog:
- Update Lunatic Protein Concentration parser to report missing Plate ID
- namespace:
Updated 10 months ago